Docstring:
Usage: qiime phylogeny midpoint-root [OPTIONS]
Midpoint root an unrooted phylogenetic tree.
Inputs:
--i-tree ARTIFACT Phylogeny[Unrooted]
The phylogenetic tree to be rooted. [required]
Outputs:
--o-rooted-tree ARTIFACT
Phylogeny[Rooted] The rooted phylogenetic tree. [required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr during
execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--help Show this message and exit.
Import:
from qiime2.plugins.phylogeny.methods import midpoint_root
Docstring:
Midpoint root an unrooted phylogenetic tree.
Midpoint root an unrooted phylogenetic tree.
Parameters
----------
tree : Phylogeny[Unrooted]
The phylogenetic tree to be rooted.
Returns
-------
rooted_tree : Phylogeny[Rooted]
The rooted phylogenetic tree.
