longitudinal¶
| Description |
This QIIME 2 plugin supports methods for analysis of time series data, involving either paired sample comparisons or longitudinal study designs. |
|---|---|
| Version | 2024.5.0 |
| Website | https://github.com/qiime2/q2-longitudinal |
| Support |
Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org |
| q2cli Invocation | qiime longitudinal
|
| Artifact API Import | from qiime2.plugins import longitudinal
|
| Citations |
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Pipelines¶
Methods¶
Visualizers¶
- anova: ANOVA test
- linear-mixed-effects: Linear mixed effects modeling
- pairwise-differences: Paired difference testing and boxplots
- pairwise-distances: Paired pairwise distance testing and boxplots
- plot-feature-volatility: Plot longitudinal feature volatility and importances
- volatility: Generate interactive volatility plot