Docstring:
Usage: qiime feature-table presence-absence [OPTIONS]
Convert frequencies to binary values indicating presence or absence of a
feature in a sample.
Inputs:
--i-table ARTIFACT FeatureTable[Frequency | RelativeFrequency]
The feature table to be converted into
presence/absence abundances. [required]
Outputs:
--o-presence-absence-table ARTIFACT FeatureTable[PresenceAbsence]
The resulting presence/absence feature table.
[required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr during
execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--help Show this message and exit.
Import:
from qiime2.plugins.feature_table.methods import presence_absence
Docstring:
Convert to presence/absence
Convert frequencies to binary values indicating presence or absence of a
feature in a sample.
Parameters
----------
table : FeatureTable[Frequency | RelativeFrequency]
The feature table to be converted into presence/absence abundances.
Returns
-------
presence_absence_table : FeatureTable[PresenceAbsence]
The resulting presence/absence feature table.
