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Description This QIIME 2 plugin wraps Emperor and supports interactive visualization of ordination plots.
Version 2024.5.0
Support Please post to the QIIME 2 forum for help with this plugin:
q2cli Invocation
qiime emperor
Artifact API Import
from qiime2.plugins import emperor

  • Yoshiki Vázquez-Baeza, Antonio Gonzalez, Larry Smarr, Daniel McDonald, James T Morton, Jose A Navas-Molina, and Rob Knight. Bringing the dynamic microbiome to life with animations. Cell host & microbe, 21(1):7–10, 2017. doi:10.1016/j.chom.2016.12.009.

  • Yoshiki Vázquez-Baeza, Meg Pirrung, Antonio Gonzalez, and Rob Knight. Emperor: a tool for visualizing high-throughput microbial community data. Gigascience, 2(1):16, 2013. doi:10.1186/2047-217X-2-16.