Docstring:
Usage: qiime demux tabulate-read-counts [OPTIONS]
Generate a per-sample count of sequence reads.
Inputs:
--i-sequences ARTIFACTS... List[SampleData[SequencesWithQuality |
PairedEndSequencesWithQuality | JoinedSequencesWithQuality]]
One or more collections of demultiplexed sequences.
[required]
Outputs:
--o-counts ARTIFACT
ImmutableMetadata [required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr during
execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--help Show this message and exit.
Import:
from qiime2.plugins.demux.methods import tabulate_read_counts
Docstring:
Tabulate counts per sample
Generate a per-sample count of sequence reads.
Parameters
----------
sequences : List[SampleData[SequencesWithQuality | PairedEndSequencesWithQuality | JoinedSequencesWithQuality]]
One or more collections of demultiplexed sequences.
Returns
-------
counts : ImmutableMetadata
