Docstring:
Usage: qiime types collate-ortholog-annotations [OPTIONS]
Takes a collection of GenomeData[NOG]'s and collates them into a single
artifact.
Inputs:
--i-ortholog-annotations ARTIFACTS... List[GenomeData[NOG]]
Collection of ortholog annotations. [required]
Outputs:
--o-collated-annotations ARTIFACT
GenomeData[NOG] Collated ortholog annotations. [required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr
during execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--use-cache DIRECTORY Specify the cache to be used for the intermediate
work of this action. If not provided, the default
cache under $TMP/qiime2/ will be used.
IMPORTANT FOR HPC USERS: If you are on an HPC system
and are using parallel execution it is important to
set this to a location that is globally accessible to
all nodes in the cluster.
--help Show this message and exit.
Import:
from qiime2.plugins.types.methods import collate_ortholog_annotations
Docstring:
Collate ortholog annotations.
Takes a collection of GenomeData[NOG]'s and collates them into a single
artifact.
Parameters
----------
ortholog_annotations : List[GenomeData[NOG]]
Collection of ortholog annotations.
Returns
-------
collated_annotations : GenomeData[NOG]
Collated ortholog annotations.
