wilcoxon-srt-facet: Per-facet Wilcoxon Signed Rank Test¶

Docstring:

Usage: qiime stats wilcoxon-srt-facet [OPTIONS]

Inputs:
  --i-distribution ARTIFACT Dist1D[Multi | NestedOrdered | NestedUnordered,
    Matched]                                                        [required]
Parameters:
  --p-ignore-empty-comparator / --p-no-ignore-empty-comparator
                          Ignore any group that does not have any overlapping
                          subjects with comparison group. These groups will
                          have NaNs in the stats table output  [default: True]
Outputs:
  --o-stats ARTIFACT
    StatsTable[Pairwise]                                            [required]
Miscellaneous:
  --output-dir PATH       Output unspecified results to a directory
  --verbose / --quiet     Display verbose output to stdout and/or stderr
                          during execution of this action. Or silence output
                          if execution is successful (silence is golden).
  --recycle-pool TEXT     Use a cache pool for pipeline resumption. QIIME 2
                          will cache your results in this pool for reuse by
                          future invocations. These pool are retained until
                          deleted by the user. If not provided, QIIME 2 will
                          create a pool which is automatically reused by
                          invocations of the same action and removed if the
                          action is successful. Note: these pools are local to
                          the cache you are using.
  --no-recycle            Do not recycle results from a previous failed
                          pipeline run or save the results from this run for
                          future recycling.
  --parallel              Execute your action in parallel. This flag will use
                          your default parallel config.
  --parallel-config FILE  Execute your action in parallel using a config at
                          the indicated path.
  --example-data PATH     Write example data and exit.
  --citations             Show citations and exit.
  --use-cache DIRECTORY   Specify the cache to be used for the intermediate
                          work of this action. If not provided, the default
                          cache under $TMP/qiime2/ will be used.
                          IMPORTANT FOR HPC USERS: If you are on an HPC system
                          and are using parallel execution it is important to
                          set this to a location that is globally accessible
                          to all nodes in the cluster.
  --help                  Show this message and exit.

Examples:
  # ### example: wilcoxon srt facet
  qiime stats wilcoxon-srt-facet \
    --i-distribution dist.qza \
    --o-stats stats.qza