Docstring:
Usage: qiime stats collate-stats [OPTIONS]
Converts a collection of stats tables into a single table
Inputs:
--i-tables ARTIFACTS... Collection[StatsTable[Pairwise]]
[required]
Outputs:
--o-table ARTIFACT StatsTable[Pairwise]
[required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr
during execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--use-cache DIRECTORY Specify the cache to be used for the intermediate
work of this action. If not provided, the default
cache under $TMP/qiime2/ will be used.
IMPORTANT FOR HPC USERS: If you are on an HPC system
and are using parallel execution it is important to
set this to a location that is globally accessible to
all nodes in the cluster.
--help Show this message and exit.
Import:
from qiime2.plugins.stats.methods import collate_stats
Docstring:
Combine and FDR correct multiple stats
Converts a collection of stats tables into a single table
Parameters
----------
tables : Collection[StatsTable[Pairwise]]
Returns
-------
table : StatsTable[Pairwise]