Docstring:
Usage: qiime rescript reverse-transcribe [OPTIONS]
Reverse transcribe RNA to DNA sequences. Accepts aligned or unaligned RNA
sequences as input.
Inputs:
--i-rna-sequences ARTIFACT FeatureData[AlignedRNASequence¹ |
RNASequence²] RNA Sequences to reverse transcribe to DNA.
[required]
Outputs:
--o-dna-sequences ARTIFACT FeatureData[AlignedSequence¹ | Sequence²]
Reverse-transcribed DNA sequences. [required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr
during execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--use-cache DIRECTORY Specify the cache to be used for the intermediate
work of this action. If not provided, the default
cache under $TMP/qiime2/ will be used.
IMPORTANT FOR HPC USERS: If you are on an HPC system
and are using parallel execution it is important to
set this to a location that is globally accessible to
all nodes in the cluster.
--help Show this message and exit.
Import:
from qiime2.plugins.rescript.methods import reverse_transcribe
Docstring:
Reverse transcribe RNA to DNA sequences.
Reverse transcribe RNA to DNA sequences. Accepts aligned or unaligned RNA
sequences as input.
Parameters
----------
rna_sequences : FeatureData[AlignedRNASequence¹ | RNASequence²]
RNA Sequences to reverse transcribe to DNA.
Returns
-------
dna_sequences : FeatureData[AlignedSequence¹ | Sequence²]
Reverse-transcribed DNA sequences.
