quality-control¶
| Description |
This QIIME 2 plugin supports methods for assessing and controlling the quality of feature and sequence data. |
|---|---|
| Version | 2024.10.0 |
| Website | https://github.com/qiime2/q2-quality-control |
| Support |
Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org |
| q2cli Invocation | qiime quality-control
|
| Artifact API Import | from qiime2.plugins import quality_control
|
Pipelines¶
Methods¶
Visualizers¶
- decontam-score-viz: Generate a histogram representation of the scores
- evaluate-composition: Evaluate expected vs. observed taxonomic composition of samples
- evaluate-seqs: Compare query (observed) vs. reference (expected) sequences.
- evaluate-taxonomy: Evaluate expected vs. observed taxonomic assignments