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tabulate: Interactively explore Metadata in an HTML tableΒΆ

Docstring:

Usage: qiime metadata tabulate [OPTIONS]

  Generate a tabular view of Metadata. The output visualization supports
  interactive filtering, sorting, and exporting to common file formats.

Parameters:
  --m-input-file METADATA...
    (multiple            The metadata to tabulate.
     arguments will be
     merged)                                                        [required]
  --p-page-size INTEGER  The maximum number of Metadata records to display
                         per page                               [default: 100]
Outputs:
  --o-visualization VISUALIZATION
                                                                    [required]
Miscellaneous:
  --output-dir PATH      Output unspecified results to a directory
  --verbose / --quiet    Display verbose output to stdout and/or stderr
                         during execution of this action. Or silence output if
                         execution is successful (silence is golden).
  --example-data PATH    Write example data and exit.
  --citations            Show citations and exit.
  --use-cache DIRECTORY  Specify the cache to be used for the intermediate
                         work of this action. If not provided, the default
                         cache under $TMP/qiime2/ will be used.
                         IMPORTANT FOR HPC USERS: If you are on an HPC system
                         and are using parallel execution it is important to
                         set this to a location that is globally accessible to
                         all nodes in the cluster.
  --help                 Show this message and exit.

Import:

from qiime2.plugins.metadata.visualizers import tabulate

Docstring:

Interactively explore Metadata in an HTML table

Generate a tabular view of Metadata. The output visualization supports
interactive filtering, sorting, and exporting to common file formats.

Parameters
----------
input : Metadata
    The metadata to tabulate.
page_size : Int, optional
    The maximum number of Metadata records to display per page

Returns
-------
visualization : Visualization