longitudinal¶
Description |
This QIIME 2 plugin supports methods for analysis of time series data, involving either paired sample comparisons or longitudinal study designs. |
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Version | 2024.10.0 |
Website | https://github.com/qiime2/q2-longitudinal |
Support |
Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org |
q2cli Invocation | qiime longitudinal
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Artifact API Import | from qiime2.plugins import longitudinal
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Citations |
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Pipelines¶
Methods¶
Visualizers¶
- anova: ANOVA test
- linear-mixed-effects: Linear mixed effects modeling
- pairwise-differences: Paired difference testing and boxplots
- pairwise-distances: Paired pairwise distance testing and boxplots
- plot-feature-volatility: Plot longitudinal feature volatility and importances
- volatility: Generate interactive volatility plot