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tabulate-feature-frequencies: Tabulate feature frequencies

Docstring:

Usage: qiime feature-table tabulate-feature-frequencies [OPTIONS]

  Tabulate sample count and total frequency per feature.

Inputs:
  --i-table ARTIFACT FeatureTable[Frequency | PresenceAbsence |
    RelativeFrequency]   The input feature table.                   [required]
Outputs:
  --o-feature-frequencies ARTIFACT
    ImmutableMetadata    Per-sample and total frequencies per feature.
                                                                    [required]
Miscellaneous:
  --output-dir PATH      Output unspecified results to a directory
  --verbose / --quiet    Display verbose output to stdout and/or stderr
                         during execution of this action. Or silence output if
                         execution is successful (silence is golden).
  --example-data PATH    Write example data and exit.
  --citations            Show citations and exit.
  --use-cache DIRECTORY  Specify the cache to be used for the intermediate
                         work of this action. If not provided, the default
                         cache under $TMP/qiime2/ will be used.
                         IMPORTANT FOR HPC USERS: If you are on an HPC system
                         and are using parallel execution it is important to
                         set this to a location that is globally accessible to
                         all nodes in the cluster.
  --help                 Show this message and exit.

Examples:
  # ### example: feature table tabulate feature frequencies
  qiime feature-table tabulate-feature-frequencies \
    --i-table feature-table.qza \
    --o-feature-frequencies feature-frequencies.qza

Import:

from qiime2.plugins.feature_table.methods import tabulate_feature_frequencies

Docstring:

Tabulate feature frequencies

Tabulate sample count and total frequency per feature.

Parameters
----------
table : FeatureTable[Frequency | PresenceAbsence | RelativeFrequency]
    The input feature table.

Returns
-------
feature_frequencies : ImmutableMetadata
    Per-sample and total frequencies per feature.