diversity-lib¶
| Description |
This QIIME 2 plugin computes individual metrics for community alpha and beta diversity. |
|---|---|
| Version | 2024.10.0 |
| Website | https://github.com/qiime2/q2-diversity-lib |
| Support |
Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org |
| q2cli Invocation | qiime diversity-lib
|
| Artifact API Import | from qiime2.plugins import diversity_lib
|
Methods¶
- alpha-passthrough: Alpha Passthrough (non-phylogenetic)
- beta-passthrough: Beta Passthrough (non-phylogenetic)
- beta-phylogenetic-meta-passthrough: Beta Phylogenetic Meta Passthrough
- beta-phylogenetic-passthrough: Beta Phylogenetic Passthrough
- bray-curtis: Bray-Curtis Dissimilarity
- faith-pd: Faith’s Phylogenetic Diversity
- jaccard: Jaccard Distance
- observed-features: Observed Features
- pielou-evenness: Pielou’s Evenness
- shannon-entropy: Shannon’s Entropy
- unweighted-unifrac: Unweighted Unifrac
- weighted-unifrac: Weighted Unifrac