Docstring:
Usage: qiime demux partition-samples-single [OPTIONS]
Partition demultiplexed single end sequences into individual samples or the
number of partitions specified.
Inputs:
--i-demux ARTIFACT SampleData[SequencesWithQuality¹ |
JoinedSequencesWithQuality²]
The demultiplexed sequences to partition. [required]
Parameters:
--p-num-partitions INTEGER
Range(1, None) The number of partitions to split the demultiplexed
sequences into. Defaults to partitioning into
individual samples. [optional]
Outputs:
--o-partitioned-demux ARTIFACTS...
Collection[SampleData[SequencesWithQuality¹ |
JoinedSequencesWithQuality²]]
The partitioned demultiplexed sequences. [required]
Miscellaneous:
--output-dir PATH Output unspecified results to a directory
--verbose / --quiet Display verbose output to stdout and/or stderr
during execution of this action. Or silence output if
execution is successful (silence is golden).
--example-data PATH Write example data and exit.
--citations Show citations and exit.
--use-cache DIRECTORY Specify the cache to be used for the intermediate
work of this action. If not provided, the default
cache under $TMP/qiime2/ will be used.
IMPORTANT FOR HPC USERS: If you are on an HPC system
and are using parallel execution it is important to
set this to a location that is globally accessible to
all nodes in the cluster.
--help Show this message and exit.
Import:
from qiime2.plugins.demux.methods import partition_samples_single
Docstring:
Split demultiplexed sequence data into partitions.
Partition demultiplexed single end sequences into individual samples or the
number of partitions specified.
Parameters
----------
demux : SampleData[SequencesWithQuality¹ | JoinedSequencesWithQuality²]
The demultiplexed sequences to partition.
num_partitions : Int % Range(1, None), optional
The number of partitions to split the demultiplexed sequences into.
Defaults to partitioning into individual samples.
Returns
-------
partitioned_demux : Collection[SampleData[SequencesWithQuality¹ | JoinedSequencesWithQuality²]]
The partitioned demultiplexed sequences.
