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demux¶
| Description |
This QIIME 2 plugin supports demultiplexing of single-end and paired-end sequence reads and visualization of sequence quality information. |
|---|---|
| Version | 2024.10.0 |
| Website | https://github.com/qiime2/q2-demux |
| Support |
Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org |
| q2cli Invocation | qiime demux
|
| Artifact API Import | from qiime2.plugins import demux
|
Methods¶
- emp-paired: Demultiplex paired-end sequence data generated with the EMP protocol.
- emp-single: Demultiplex sequence data generated with the EMP protocol.
- filter-samples: Filter samples out of demultiplexed data.
- partition-samples-paired: Split demultiplexed sequence data into partitions.
- partition-samples-single: Split demultiplexed sequence data into partitions.
- subsample-paired: Subsample paired-end sequences without replacement.
- subsample-single: Subsample single-end sequences without replacement.
- tabulate-read-counts: Tabulate counts per sample