Fork me on GitHub

transpose: Transpose a feature table.ΒΆ

Docstring:

Usage: qiime feature-table transpose [OPTIONS]

  Transpose the rows and columns (typically samples and features) of a
  feature table.

Options:
  --i-table ARTIFACT PATH FeatureTable[Frequency]
                                  The feature table to be transposed.
                                  [required]
  --o-transposed-feature-table ARTIFACT PATH FeatureTable[Frequency]
                                  The resulting transposed feature table.
                                  [required if not passing --output-dir]
  --output-dir DIRECTORY          Output unspecified results to a directory
  --cmd-config FILE               Use config file for command options
  --verbose                       Display verbose output to stdout and/or
                                  stderr during execution of this action.
                                  [default: False]
  --quiet                         Silence output if execution is successful
                                  (silence is golden).  [default: False]
  --citations                     Show citations and exit.
  --help                          Show this message and exit.

Import:

from qiime2.plugins.feature_table.methods import transpose

Docstring:

Transpose a feature table.

Transpose the rows and columns (typically samples and features) of a
feature table.

Parameters
----------
table : FeatureTable[Frequency]
    The feature table to be transposed.

Returns
-------
transposed_feature_table : FeatureTable[Frequency]
    The resulting transposed feature table.