Fork me on GitHub

visualize-stats: Visualize Deblur stats per sample.ΒΆ

Docstring:

Usage: qiime deblur visualize-stats [OPTIONS]

  Display Deblur statistics per sample

Options:
  --i-deblur-stats ARTIFACT PATH DeblurStats
                                  Summary statistics of the Deblur process.
                                  [required]
  --o-visualization VISUALIZATION PATH
                                  [required if not passing --output-dir]
  --output-dir DIRECTORY          Output unspecified results to a directory
  --cmd-config FILE               Use config file for command options
  --verbose                       Display verbose output to stdout and/or
                                  stderr during execution of this action.
                                  [default: False]
  --quiet                         Silence output if execution is successful
                                  (silence is golden).  [default: False]
  --citations                     Show citations and exit.
  --help                          Show this message and exit.

Import:

from qiime2.plugins.deblur.visualizers import visualize_stats

Docstring:

Visualize Deblur stats per sample.

Display Deblur statistics per sample

Parameters
----------
deblur_stats : DeblurStats
    Summary statistics of the Deblur process.

Returns
-------
visualization : Visualization