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cutadapt

Description This QIIME 2 plugin uses cutadapt to work with adapters (e.g. barcodes, primers) in sequence data.
Version 2018.11.0
Website https://github.com/qiime2/q2-cutadapt
Support Please post to the QIIME 2 forum for help with this plugin: https://forum.qiime2.org
q2cli Invocation
qiime cutadapt
Artifact API Import
from qiime2.plugins import cutadapt

Citations

[cutadapt:Mar11]Marcel Martin. Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet. journal, 17(1):pp–10, 2011. doi:10.14806/ej.17.1.200.